A New Graphical User Interface for Teaching NMR
نویسندگان
چکیده
The classical Nuclear Magnetic Resonance (NMR) vector model is known to be very effective and useful in teaching basic NMR 1D pulse sequences such as spin echo. For more complicated spin systems, density matrix calculation is often used. This method is known to be very complicated and not easy to follow after couple steps. Students usually get lost within the calculation and loose the physical meaning of the effect of different NMR pulses and other operations (chemical shifts, scalar-couplings) on the spin-system under investigation. As a compromise, another methodology has been developed which depends on the spin angular momentum operators. This is known as product operator formalism which involves less mathematical calculations, but still requires the user to know the correct outcome of different NMR pulses, scalar couplings and chemical shifts on different spin operators. We have developed product operator graphical user interface (OP-GUI) using MATLAB software that is capable of calculating product operators of up to four-coupled 1⁄2 spin systems. The effect of NMR pulses, scalarcoupling and chemical shifts on the spin system under investigation can be easily calculated. In this paper, several examples are given as prove of concept to show the capability and flexibility of the obtained OP-GUI in dealing with spin systems. We believe the obtained calculator is an effective teaching tool for new students in NMR and will help them to better understand and interpret complicated NMR pulse sequences applied on up to four weakly coupled 1⁄2 spin systems.
منابع مشابه
Software Implementation and Experimentation with a New Genetic Algorithm for Layout Design
This paper discusses the development of a new GA for layout design. The GA was already designed and reported. However the implementation used in the earlier work was rudimentary and cumbersome, having no suitable Graphical User Interface, GUI. This paper discusses the intricacies of the algorithm and the GA operators used in previous work. It also reports on implementation of a new GA operator ...
متن کاملNMRFx Processor: a cross-platform NMR data processing program
NMRFx Processor is a new program for the processing of NMR data. Written in the Java programming language, NMRFx Processor is a cross-platform application and runs on Linux, Mac OS X and Windows operating systems. The application can be run in both a graphical user interface (GUI) mode and from the command line. Processing scripts are written in the Python programming language and executed so t...
متن کامل18 NOE Assignment With ARIA 2 . 0 The Nuts and Bolts
The assignment of nuclear Overhauser effect (NOE) resonances is the crucial step in determining the three-dimensional structure of biomolecules from nuclear magnetic resonance (NMR) data. Our program, Ambiguous Retraints for Iterative Assignment (ARIA), treats Noe assignment as an integral part of the structure determination process. This chapter briefly outlines the method and discusses how to...
متن کاملA New Single-Display Intelligent Adaptive Interface for Controlling a Group of UAVs
The increasing use of unmanned aerial vehicles (UAVs) or drones in different civil and military operations has attracted attention of many researchers and science communities. One of the most notable challenges in this field is supervising and controlling a group or a team of UAVs by a single user. Thereupon, we proposed a new intelligent adaptive interface (IAI) to overcome to this challenge. ...
متن کاملتحلیل میزان درک کاربران از نمادهای تصویری محیط رابط گرافیکی نرمافزار سیمرغ
Purpose: This research is devoted to study the icons in graphical user interface of Simorgh library software and analyze the users’ understanding of and interaction with this software in Birjand University. Methodology: The methodology of this research is of survey type and it is an applied study. To measure the responders’ understanding of icons in different pages of search section in Simorgh...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره شماره
صفحات -
تاریخ انتشار 2014